functions in drat.i - d
default_gate
default_gate(times) initial value of drat_gate. Refer to the source code to learn how to write your own gate function, making proper use of drat_start and drat_stop options in addition to the input times. Interpreted function, defined at i0/drat.i line 774SEE ALSO: gauss_gate, drat_gate
default_integrate
atten_emit= default_integrate(f, mesh, time, irays, slimits) is the default drat_integrate routine. On entry, file F is positioned at TIME, from which MESH has already been read. IRAYS and SLIMITS are the rays coordinates (in internal format) and integration limits. The result should be ngroup-by-2-by-raydims, where the second index is 1 for the attenuation factor, 2 for the self-emission (specific intensity due to emission along the ray). OPTIONS: drat_linear, drat_ocompute, drat_oadjust, drat_emult, drat_amult, drat_omult, drat_nomilne, drat_ekap, drat_akap, drat_glist Interpreted function, defined at i0/drat.i line 169SEE ALSO: streak
default_ocompute
default_ocompute(f, time) initial value of drat_ocompute. Extracts drat_akap and drat_ekap from file F, possibly using the subset drat_glist. TIME is unused. Interpreted function, defined at i0/drat.i line 719
drat_akap
drat_akap Keyword, defined at i0/drat.i line 447SEE drat_rt
drat_amult
drat_amult, drat_emult, drat_omult are optional opacity multipliers used by the streak, snap, and streak_save functions. The multipliers are applied to the opacity and source functions before the transport equation is integrated. Setting them to [] is the same as setting them to 1.0. DRAT_EMULT - multiply the emissivity by this factor, without affecting the absorption opac <- opac source <- source*DRAT_EMULT DRAT_AMULT - multiply the absorption opacity by this factor, without affecting the emissivity opac <- opac*(DRAT_AMULT+1.e-20) source <- source/(DRAT_AMULT+1.e-20) DRAT_OMULT - multiply BOTH the absorption opacity and the emissivity by this factor opac <- opac*DRAT_OMULT source <- source DRAT_IREG_ADJ - list of region numbers to be zeroed. This has the same effect as a zero DRAT_OMULT in the corresponding zones, but is more efficient. Since opac and source are mesh-by-ngroup (where mesh is usually kmax-by-lmax), DRAT_EMULT, DRAT_AMULT, DRAT_OMULT can be scalars, mesh arrays, 1-by-1-by-ngroup arrays, or kmax-by-lmax-by-ngroup arrays. If DRAT_GLIST is non-nil, ngroup should be numberof(DRAT_GLIST), not the total number of groups. Keyword, defined at i0/drat.i line 486SEE ALSO: drat_glist, adjust_ireg
drat_backlight
func drat_backlight(time) { extern gb, gav; ... } or drat_backlight=SEE ALSO: snap, drat_channel, drat_gate, apply_funcsor drat_backlight= supplies a backlighter for the snap function. Given ngroup-by-nrays transparency fraction transp and self-emission selfem (in specific intensity units), snap applies the backlighter using: result= backlighter*transp + selfem; where backlighter is drat_backlight(time), if drat_backlight is a function, or drat_backlight itself, if drat_backlight is an array. Note that the result (or value) of backlighter_func must be conformable with transp and selfem. Most commonly, drat_backlight will be a vector of length ngroup -- a Planckian backlighter at temperature Tr would be drat_backlight= B_nu(gav, Tr); -- but that a scalar, 1-by-nrays, or ngroup-by-nrays are all possible. Note also that if drat_backlight is a function, the gb and gav arrays read from the history file are available as external variables. Keyword, defined at i0/drat.i line 586
drat_channel
func drat_channel(time) { extern gb, gav; ... } or drat_channel=SEE ALSO: drat_glist, snap, drat_backlight, drat_gate, apply_funcsor drat_channel= supplies a channel response for the snap function. Use the drat_glist option to select a subset of the groups; drat_channel can be used in addition to drat_glist. Given ngroup-by-nrays specific intensity, snap applies the channel response using: result= drat_channel(..,+)*specific_intensity(+,..); if drat_channel is an array, or result= drat_channel(specific_intensity, time); if drat_channel is a function. Note that if drat_channel is an array, its final dimension must be of length ngroup. A multidimensional drat_channel represents more than one channel response function. Most drat_channel arrays will be proportional to the bin widths gb(dif). The correct way to interpolate a filter function transmission fraction known at photon enrgies efa is: drat_channel= integ(ffa, efa, f.gb)(dif) If you have more than one channel, the first dimension of drat_channel should be the channel number. The best way to generate a filter response function is to use Yorick's cold opacity library. To do this: #include "coldopac/xray.i" This will define the functions cold_opacity and cold_reflect, which you can use to build up channel response functions from filter materials and thicknesses and mirror compositions. Note also that if drat_channel is a function, the gb and gav arrays read from the history file are available as external variables. Keyword, defined at i0/drat.i line 614
drat_compress
func drat_compress(transp, selfem, time) or drat_compress=supplies a compression algorithm to the streak function. The drat_compress can return anything, as long as it returns the same shape array (or nil) at each time. The snap_worker and streak_saver routines are examples of compression algorithms. Keyword, defined at i0/drat.i line 577
drat_ekap
drat_ekap Keyword, defined at i0/drat.i line 447SEE drat_rt
drat_emult
drat_emult Keyword, defined at i0/drat.i line 486SEE drat_amult
drat_gate
func drat_gate(times) { extern gb, gav; ... } or drat_gate=SEE ALSO: snap, drat_backlight, drat_channel, apply_funcs, drat_start,supplies a gate (to make gated images) for the snap function. For a simple gate, the drat_start and drat_stop options will be more efficient than drat_gate. The input to drat_gate is the list of dump times; the output should be the "effective dt" for each of these dumps. This is the product of the actual time interval and the gate transparency; the sum of the return vector is the gate time. See the default_gate and gaussian_gate functions for examples. Note that the gb and gav arrays read from the history file are available as external variables, in case the gate transparency is frequency dependent. Keyword, defined at i0/drat.i line 654
drat_stop, gaussian_gate, default_gate
drat_gav
drat_gav Keyword, defined at i0/drat.i line 447SEE drat_rt
drat_gb
drat_gb Keyword, defined at i0/drat.i line 447SEE drat_rt
drat_glist
drat_glist if non-nil, an index list into the final dimension of akap and ekap. Only these groups will be read from disk and used in the transport calculation. All other options which depend on "ngroup" or "gav" should use numberof(DRAT_GLIST) or gav(DRAT_GLIST) instead. The "gb" group boundary array is not well-defined in this case, since the group boundaries need not be contiguous. The best strategy is to save drat_glist and the original gb array. DRAT_GLIST must be a 1-D, 1-origin index list. (1-origin even if gav and gb are not 1-origin, since use_origins(0) will be in effect when DRAT_GLIST is used.) The streak function will be most efficient if DRAT_GLIST is strictly increasing. Keyword, defined at i0/drat.i line 533SEE ALSO: drat_channel
drat_integrate
func drat_integrate(file, mesh, time, irays, slimits) { ... } or drat_integrate=integrate the transport equation. FILE is positioned to TIME, and MESH has already been read. IRAYS are the rays in internal format and SLIMITS is the integration limits. The return value should be ngroup-by-2-by-raydims (where irays is 6-by-raydims). The default integrator is default_integrate, which handles the drat_ocompute, drat_oadjust, drat_amult, drat_emult, drat_omult, drat_akap, drat_ekap, drat_glist, drat_linear, and drat_nomilne options. Reasons to replace the default routine include: (1) Some or all of the opacities come from a source other than the FILE, e.g.- a second post processing file. (2) The total number of zones times number of groups is debilitatingly large, even though the number of rays times the number of groups is not. Keyword, defined at i0/drat.i line 695
drat_ireg
drat_ireg Keyword, defined at i0/drat.i line 447SEE drat_rt
drat_ireg_adj
drat_ireg_adj Keyword, defined at i0/drat.i line 486SEE drat_amult
drat_isymz
drat_isymz Keyword, defined at i0/drat.i line 447SEE drat_rt
drat_khold
drat_khold Keyword, defined at i0/drat.i line 447SEE drat_rt
drat_lhold
drat_lhold Keyword, defined at i0/drat.i line 447SEE drat_rt
drat_linear
drat_linear, drat_nomilne Set DRAT_LINEAR to 1 in order to use integ_linear to perform the transport integration instead of the default integ_flat. The DRAT_NOMILNE option, if non-nil, is a list of "norad" edges in the (rt,zt) mesh (other than the khold and lhold lines), which is required for the source function point centering operation. DRAT_NOMILNE is a 2 or 3-D array with the format: [[k1,l1], [k2,l2]] or an array of elements of that form, where either k1==k2 or l1==l2. (Where k is the first index of rt or zt and l is the second.) DRAT_NOMILNE must always be a 1-origin index list into the (rt,zt) mesh, independent of the index origins of rt and/or zt. Keyword, defined at i0/drat.i line 551SEE ALSO: integ_linear, integ_flat
drat_nomilne
drat_nomilne Keyword, defined at i0/drat.i line 551SEE drat_linear
drat_oadjust
drat_oadjust Keyword, defined at i0/drat.i line 675SEE drat_ocompute
drat_ocompute
func drat_ocompute(file, time) { extern opac, source; ...} or drat_ocompute=and func drat_oadjust(file, time) { extern opac, source; ...} or drat_oadjust= supply opacities from a source other than the file.drat_akap and file.drat_ekap, or adjust these values. You need to be cognizant of the drat_glist option (see get_kaps source code). DRAT_OCOMPUTE must set opac and source entirely on its own; DRAT_OADJUST will be called afterwards. The default DRAT_OCOMPUTE (default_ocompute) reads drat_akap and drat_ekap from FILE, optionally extracting drat_glist, and places them in opac and source. DRAT_OADJUST is free to modify opac and source them at will; the default DRAT_OADJUST is nil, which means no adjustment. Any opacity or emissivity multipliers will be applied after DRAT_OADJUST, as will the point centering operation if necessary (DRAT_OADJUST should return zone centered opacities). Keyword, defined at i0/drat.i line 675
drat_omult
drat_omult Keyword, defined at i0/drat.i line 486SEE drat_amult
drat_quiet
drat_quiet By default, Drat prints the total number of records it will process, and the number of the record it is currently processing. If drat_quiet is non-nil and non-zero, the printout is supressed. Keyword, defined at i0/drat.i line 712
drat_rt
drat_rt, drat_zt, drat_ireg, drat_akap, drat_ekap, drat_isymz, drat_khold, drat_lhold, drat_gb, drat_gav can be set to strings other than "rt", "zt", etc. (their default values) to force the streak, snap, and streak_save routines to use alternative names to look up these quantites in the history file. The following 4 variables are NOT optional: (rt, zt) must be a 2-D mesh in cylindrical coordinates akap is a mesh-by-ngroup array of absorption opacities, in units of reciprocal length (1/rt or 1/zt) ekap is a mesh-by-ngroup array of source functions, in (arbitrary) specific intensity units The akap and ekap arrays must be zone centered; the first row and column of akap and ekap will be ignored. The remaining variables are all optional -- set the drat_.. variable to [] to ignore them completely. Otherwise, they will be ignored if they are not present in the history file, and used as follows otherwise: ireg is a mesh-size region number array (zone centered as akap and ekap). Zones where ireg==0 do not exist. isymz is non-zero if the problem has reflection symmetry about z=0, zero otherwise. The drat_symmetry option overrides this value. khold and lhold are mesh indices specifying "hold lines" -- khold is an index into the first dimension of (rt,zt), and lhold is an index into the second dimension of (rt,zt). These are used only if the drat_linear option is specified. gb and gav are, respectively, the group boundary energies and group center energies. These are used by the snap and streak_save functions. Keyword, defined at i0/drat.i line 447SEE ALSO: streak, snap, streak_save, drat_symmetry, drat_linear
drat_start
drat_start, drat_stop if non-nil, specify the minimum and maximum dump times which will be considered by the streak, snap, or streak_save functions. Keyword, defined at i0/drat.i line 520
drat_static
drat_static if non-nil, a list of strings representing variable names in the input file which the streak_save function should copy to the output file. Keyword, defined at i0/drat.i line 569SEE ALSO: streak_save
drat_stop
drat_stop Keyword, defined at i0/drat.i line 520SEE drat_start
drat_symmetry
drat_symmetry set to 2 to force spherical symmetry, 1 to force reflection symmetry about the z=0 plane, 0 to force no symmetry, [] (the default) to use the guess_symmetry function to compute problem symmetry. Keyword, defined at i0/drat.i line 526
drat_zt
drat_zt Keyword, defined at i0/drat.i line 447SEE drat_rt